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Number of items: 47.

Dai, Xiangfeng, Spasic, Irena and Andres, Frederic 2017. A framework for automated rating of online reviews against the underlying topics. Presented at: ACM Southeast Conference, Kennesaw State University, Georgia, USA, 13-15 April 2017. ACM SE '17 Proceedings of the SouthEast Conference. New York: ACM, pp. 164-167. 10.1145/3077286.3077291

Neale, Steven, Spasic, Irena, Needs, Jennifer, Watkins, Gareth, Morris, Steve, Fitzpatrick, Teresa, Marshall, L and Knight, Dawn 2017. The CorCenCC crowdsourcing app: a bespoke tool for the user-driven creation of the national corpus of contemporary Welsh. Presented at: The 9th International Corpus Linguistics Conference, Birmingham, UK, 24-28 July 2017.

Preece, Alun, Spasic, Irena, Evans, Kieran, Rogers, David, Webberley, William, Roberts, Colin and Innes, Martin 2017. Sentinel: a co-designed platform for semantic enrichment of social media streams. IEEE Transactions on Computational Social Systems
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Button, Kate and Spasic, Irena 2016. Web based interventions for self-management of rehabilitation. Presented at: Enhanced Recovery after Surgery (ERAS) UK Conference, Cardiff, UK, 4th November.

Williams, Lowri, Bannister, Christian, Arribas-Ayllon, Miguel, Preece, Alun David and Spasic, Irena 2015. The role of idioms in sentiment analysis. Expert Systems with Applications 42 (21) , pp. 7375-7385. 10.1016/j.eswa.2015.05.039

Spasic, Irena, Zhao, Bo, Jones, Christopher Bernard and Button, Kate 2015. KneeTex: An ontology-driven system for information extraction from MRI reports. Journal of Biomedical Semantics 6 , p. 34. 10.1186/s13326-015-0033-1

Evans, Kieran, Trnkoczy, Jernej, Suciu, George, Suciu, Victor, Martin, Paul, Wang, Junchao, Zhao, Zhiming, Jones, Andrew Clifford, Preece, Alun David, Quevedo Fernandez, Francisco, Rogers, David, Spasic, Irena, Taylor, Ian, Stankovski, Vlado and Taherizadeh, Salman 2015. Dynamically reconfigurable workflows for time-critical applications. Presented at: SC15: The International Conference for High Performance Computing, Networking, Storage, and Analysis, New York City, NY, USA, 16-19 November 2015. WORKS '15 Proceedings of the 10th Workshop on Workflows in Support of Large-Scale Science. pp. 1-10. 10.1145/2822332.2822339

Spasic, Irena, Button, Kate, Divoli, Anna, Gupta, Satyam Kumar, Pataky, Tamas, Pizzocaro, Diego, Preece, Alun David, Van Deursen, Robert William Martin and Wilson, Chris 2015. TRAK application suite: A web-based intervention for delivering standard care for the rehabilitation of knee conditions. JMIR Research Protocols 4 (4) , e122. 10.2196/resprot.4091

Button, Kate, Roos, Paulien E., Spasic, Irena, Adamson, Paul and Van Deursen, Robert William Martin 2015. The clinical effectiveness of self-care interventions with an exercise component to manage knee conditions: a systematic review. The Knee 22 (5) , pp. 360-371. 10.1016/j.knee.2015.05.003

Moore, Simon Christopher, Alam, Mohammed Faishul, Cohen, David, Hood, Kerenza, Huang, Chao, Murphy, Simon, Playle, Rebecca Anne, Moore, Laurence Anthony Russell, Shepherd, Jonathan Paul, Sivarajasingam, Vaseekaran, Spasic, Irena, Stanton, Helen and Williams, Anne 2015. All-Wales Licensed Premises Intervention (AWLPI): a randomised controlled trial of an intervention to reduce alcohol-related violence. Public Health Research 3 (10) 10.3310/phr03100

Bhachu, Lakhveer, Soldatova, Larisa, Spasic, Irena and Button, Kate 2014. Mobile application KneeCare to support knee rehabilitation. Presented at: Science and Information Conference (SAI), London, UK, 27-29 August 2014.

Bannister, Christian, Currie, Craig John, Preece, Alun David and Spasic, Irena 2014. Automatic development of clinical prediction models with genetic programming: A case study in cardiovascular disease. Value in Health 17 (3) , A200-A201. 10.1016/j.jval.2014.03.1171

Bannister, Christian, Poole, Christopher David, Jenkins-Jones, Sara, Morgan, Christopher L., Elwyn, Glyn, Spasic, Irena and Currie, Craig John 2014. External validation of the UKPDS risk engine in incident type 2 diabetes: a need for new type 2 diabetes-specific risk equations. Diabetes Care 37 (2) , pp. 537-545. 10.2337/dc13-1159

Moore, Simon Christopher, O'Brien, Claire, Alam, Mohammed, Cohen, David, Hood, Kerenza, Huang, Chao, Moore, Laurence Anthony Russell, Murphy, Simon, Playle, Rebecca Anne, Sivarajasingam, Vaseekaran, Spasic, Irena, Williams, Anne and Shepherd, Jonathan Paul 2014. All-Wales licensed premises intervention (AWLPI): a randomised controlled trial to reduce alcohol-related violence. BMC Public Health 14 (1) , 21. 10.1186/1471-2458-14-21

Spasic, Irena, Livsey, Jacqueline, Keane, John A. and Nenadic, Goran 2014. Text mining of cancer-related information: review of current status and future directions. International Journal of Medical Informatics 83 (9) , pp. 605-623. 10.1016/j.ijmedinf.2014.06.009

Spasic, Irena, Greenwood, Mark, Preece, Alun David, Francis, Nicholas Andrew and Elwyn, Glyn 2013. FlexiTerm: a flexible term recognition method. Journal of Biomedical Semantics 4 , 27. 10.1186/2041-1480-4-27

Greenwood, Mark, Elwyn, Glyn, Francis, Nicholas Andrew, Preece, Alun David and Spasic, Irena 2013. Automatic extraction of personal experiences from patients' blogs: A case study in chronic obstructive pulmonary disease. Presented at: Third International Conference on Social Computing and its Applications, Karlsruhe, Germany, 30th September - 2nd October 2013.

Button, Kate, Van Deursen, Robert William Martin, Soldatova, Larisa and Spasic, Irena 2013. TRAK ontology: defining standard care for the rehabilitation of knee conditions. Journal of Biomedical Informatics 46 (4) , pp. 615-625. 10.1016/j.jbi.2013.04.009

Button, Kate, Roos, Paulien E., Spasic, Irena, Pataky, Tamas and Van Deursen, Robert William Martin 2013. Development of iKnee: A web based application using biomechanical data to optomize knee rehabilitation within the home environment. Presented at: The 32nd Scientific Meeting of the Physiotherapy Research Society, Cardiff, UK, 9 April 2013.

Smallbone, Kieran, Messiha, Hanan L., Carroll, Kathleen M., Winder, Catherine L., Malys, Naglis, Dunn, Warwick B., Murabito, Ettore, Swainston, Neil, Dada, Joseph O., Khan, Farid, Pir, Pınar, Simeonidis, Evangelos, Spasic, Irena, Wishart, Jill, Weichart, Dieter, Hayes, Neil W., Jameson, Daniel, Broomhead, David S., Oliver, Stephen G., Gaskell, Simon J., McCarthy, John E. G., Paton, Norman W., Westerhoff, Hans V., Kell, Douglas B. and Mendes, Pedro 2013. A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes. FEBS Letters 587 (17) , pp. 2832-2841. 10.1016/j.febslet.2013.06.043

Burnap, Peter, Spasic, Irena, Gray, William Alexander, Hilton, Jeremy Charles, Rana, Omer Farooq and Elwyn, Glyn 2012. Protecting patient privacy in distributed collaborative healthcare environments by retaining access control of shared information. Presented at: 2012 International Conference on Collaboration Technologies and Systems (CTS), Denver, CO, USA, 21-25 May 2012. Published in: Smari, Waleed W. and Charles, Fox eds. 2012 International Conference on Collaboration Technologies and Systems (CTS). Los Alamitos, CA: IEEE, pp. 490-497. 10.1109/CTS.2012.6261095

Spasic, Irena, Burnap, Peter, Greenwood, Mark and Arribas-Ayllon, Michael 2012. A naïve Bayes approach to topic classification in suicide notes. Biomedical Informatics Insights 5 (Supp 1) , pp. 87-97. 10.4137/BII.S8945

Spasic, Irena, Sarafraz, Farzaneh, Keane, John A. and Nenadic, Goran 2010. Medication information extraction with linguistic pattern matching and semantic rules. Journal of the American Medical Informatics Association 17 (5) , pp. 532-535. 10.1136/jamia.2010.003657

Dada, Joseph O., Spasic, Irena, Paton, Norman W. and Mendes, Pedro 2010. SBRML: a markup language for associating systems biology data with models. Bioinformatics 26 (7) , pp. 932-938. 10.1093/bioinformatics/btq069

Swainston, Neil, Jameson, Daniel, Li, Peter, Spasic, Irena, Mendes, Pedro and Paton, Norman W. 2010. Integrative information management for systems biology. Lecture Notes in Computer Science 6254 , pp. 164-178. 10.1007/978-3-642-15120-0_13

Masseroli, Marco, Paton, Norman W. and Spasic, Irena 2010. Chapter 15: Search Computing and the Life Sciences. Lecture Notes in Computer Science 5950 , pp. 291-306. 10.1007/978-3-642-12310-8_15

Li, P., Dada, J. O., Jameson, D., Spasic, Irena, Swainston, N., Carroll, K., Dunn, W., Khan, F., Malys, N., Messiha, H. L., Simeonidis, E., Weichart, D., Winder, C., Wishart, J., Broomhead, D. S., Goble, C. A., Gaskell, S. J., Kell, D. B., Westerhoff, H. V., Mendes, P. and Paton, N. W. 2010. Systematic integration of experimental data and models in systems biology. BMC Bioinformatics 11 , 582. 10.1186/1471-2105-11-582

Brown, Marie, Dunn, Warwick B., Dobson, P., Patel, Y., Winder, C. L., Francis-McIntyre, S., Begley, P., Carroll, K., Broadhurst, D., Tseng, A., Swainston, N., Spasic, Irena, Goodacre, Royston and Kell, Douglas B. 2009. Mass spectrometry tools and metabolite-specific databases for molecular identification in metabolomics. Analyst 134 (7) , pp. 1322-1332. 10.1039/b901179j

Spasic, Irena, Simeonidis, Evangelos, Messiha, Hanan L., Paton, Norman W. and Kell, Douglas B. 2009. KiPar, a tool for systematic information retrieval regarding parameters for kinetic modelling of yeast metabolic pathways. Bioinformatics 25 (11) , pp. 1404-1411. 10.1093/bioinformatics/btp175

Yang, Hui, Spasic, Irena, Keane, John A. and Nenadic, Goran 2009. A Text Mining Approach to the Prediction of Disease Status from Clinical Discharge Summaries. Journal of The American Medical Informatics Association 16 (4) , pp. 596-600. 10.1197/jamia.M3096

Yang, H., Spasic, Irena, Keane, J. A. and Nenadic, G. 2009. A Text Mining Approach to the Prediction of Disease Status from Clinical Discharge Summaries. JAMIA Journal of the American Medical Informatics Assocation 16 (4) , pp. 596-600. 10.1197/jamia.M3096

Herrgard, Markus J., Swainston, Neil, Dobson, Paul, Dunn, Warwick B., Arga, K. Yalcin, Arvas, Mikko, Buthgen, Nils, Borger, Simon, Costenoble, Roeland, Heinemann, Matthias, Hucka, Michael, Le Novere, Nicolas, Li, Peter, Liebermeister, Wolfram, Mo, Monica L., Oliveira, Ana Paula, Petranovic, Dina, Pettifer, Stephen, Simeonidis, Evangelos, Smallbone, Kieran, Spasic, Irena, Weichart, Dieter, Brent, Roger, Broomhead, David S., Westerhoff, Hans V., Kurdar, Betul, Penttila, Merja, Klipp, Edda, Palsson, Bernhard O., Sauer, Uwe, Oliver, Stephen G., Mendes, Pedro, Nielsen, Jens and Kell, Douglas B. 2008. A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. Nature Biotechnology 26 (10) , pp. 1155-1160. 10.1038/nbt1492

Dunn, Warwick B., Broadhurst, David, Ellis, David I., Brown, Marie, Halsall, Anthony, O'Hagan, Steven, Spasic, Irena, Tseng, Andrew and Kell, Douglas B. 2008. A GC-TOF-MS study of the stability of serum and urine metabolomes during the UK Biobank sample collection and preparation protocols. International Journal of Epidemiology 37 (S1) , i23-i30. 10.1093/ije/dym281

Spasic, Irena, Schober, Daniel, Sansone, Susanna-Assunta, Rebholz-Schuhmann, Dietrich, Kell, Douglas B. and Paton, Norman W. 2008. Facilitating the development of controlled vocabularies for metabolomics technologies with text mining. BMC bioinformatics 9 (Supp 5) 10.1186/1471-2105-9-S5-S5

Dunn, Warwick B., Broadhurst, David, Deepak, Sasalu, Buch, Mamta, McDowell, Garry, Spasic, Irena, Ellis, David I., Brooks, Nicholas, Kell, Douglas B. and Neyses, Ludwig 2007. Serum metabolomics reveals many novel metabolic markers of heart failure, including pseudouridine and 2-oxoglutarate. Metabolomics 3 (4) , pp. 413-426. 10.1007/s11306-007-0063-5

Sansone, Susanna-Assunta, Schober, Daniel, Atherton, Helen J., Fiehn, Oliver, Jenkins, Helen, Rocca-Serra, Philippe, Rubtsov, Denis V., Spasic, Irena, Soldatova, Larisa, Taylor, Chris, Tseng, Andy and Viant, Mark R. 2007. Metabolomics standards initiative: ontology working group work in progress. Metabolomics 3 (3) , pp. 249-256. 10.1007/s11306-007-0069-z

Wilkinson, Stephen J, Spasic, Irena and Ellis, David I 2006. Genomes to systems 3. Metabolomics 2 (3) , pp. 165-170. 10.1007/s11306-006-0030-6

Spasic, Irena, Dunn, Warwick B., Velarde, Giles, Tseng, Andy, Jenkins, Helen, Hardy, Nigel, Oliver, Stephen G. and Kell, Douglas B. 2006. MeMo: a hybrid SQL/XML approach to metabolomic data management for functional genomics. BMC Bioinformatics 7 , 281. 10.1186/1471-2105-7-281

Kell, Douglas B., Brown, Marie, Davey, Hazel M., Dunn, Warwick B., Spasic, Irena and Oliver, Stephen G. 2005. Metabolic footprinting and systems biology: the medium is the message. Nature Reviews. Microbiology 3 (7) , pp. 557-565. 10.1038/nrmicro1177

Spasic, Irena, Ananiadou, Sophia and Tsujii, Jun-Ichi I. 2005. MaSTerClass: a case-based reasoning system for the classification of biomedical terms. Bioinformatics 21 (11) , pp. 2748-2758. 10.1093/bioinformatics/bti338

Brown, Marie, Dunn, Warwick B., Ellis, David I., Goodacre, Royston, Handl, Julia, Knowles, Joshua D., O'Hagan, Steve, Spasic, Irena and Kell, Douglas B. 2005. A metabolome pipeline: from concept to data to knowledge. Metabolomics 1 (1) , pp. 39-51. 10.1007/s11306-005-1106-4

Spasic, Irena, Ananiadou, Sophia, McNaught, John and Kumar, Anand 2005. Text mining and ontologies in biomedicine: making sense of raw text. Briefings in Bioinformatics 6 (3) , pp. 239-251. 10.1093/bib/6.3.239

Spasic, Irena and Ananiadou, Sophia 2005. A flexible measure of contextual similarity for biomedical terms. Pacific Symposium on Biocomputing 10 , pp. 197-208.

Spasic, Irena and Ananiadou, Sophia 2004. Using automatically learnt verb selectional preferences for classification of biomedical terms. Journal of Biomedical Informatics 37 (6) , pp. 483-497. 10.1016/j.jbi.2004.08.002

Nenadic, Goran, Spasic, Irena and Ananiadou, Sophia 2004. Mining term similarities from corpora. Terminology 10 (1) , pp. 55-80. 10.1075/term.10.1.04nen

Nenadic, Goran, Spasic, Irena and Ananiadou, Sophia 2003. Terminology-driven mining of biomedical literature. Bioinformatics 19 (8) , pp. 938-943. 10.1093/bioinformatics/btg105

Nenadic, Goran, Mima, Hideki, Spasic, Irena, Ananiadou, Sophia and Tsujii, Junichi 2002. Terminology-driven literature mining and knowledge acquisition in biomedicine. International Journal of Medical Informatics 67 (1-3) , pp. 33-48. 10.1016/S1386-5056(02)00055-2 |

This list was generated on Sat Oct 21 02:32:45 2017 BST.