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Number of items: 35.

Parkes, Ronald John, Brock, Fiona, Banning, Natasha C., Hornibrook, Edward R. C., Roussel, Erwan George Philippe, Weightman, Andrew John and Fry, John Christopher 2012. Changes in methanogenic substrate utilization and communities with depth in a salt-marsh, creek sediment in southern England. Estuarine, Coastal and Shelf Science 96 (1) , pp. 170-178. 10.1016/j.ecss.2011.10.025

Webster, Gordon, Sass, Henrik, Cragg, Barry Andrew, Gorra, Roberta, Knab, Nina J., Green, Christopher J., Mathes, Falko, Fry, John Christopher, Weightman, Andrew John and Parkes, Ronald John 2011. Enrichment and cultivation of prokaryotes associated with the sulphate-methane transition zone of diffusion-controlled sediments of Aarhus Bay, Denmark under heterotrophic conditions. FEMS Microbiology Ecology 77 (2) , pp. 248-263. 10.1111/j.1574-6941.2011.01109.x

Webster, Gordon, Rinna, Joachim, Roussel, Erwan Georges Philippe, Fry, John Christopher, Weightman, Andrew John and Parkes, Ronald John 2010. Prokaryotic functional diversity in different biogeochemical depth zones in tidal sediments of the Severn Estuary, UK, revealed by stable-isotope probing. FEMS Microbiology Ecology 72 (2) , pp. 179-197. 10.1111/j.1574-6941.2010.00848.x

Webster, Gordon, Blazejak, Anna, Cragg, Barry Andrew, Schippers, Axel, Sass, Henrik, Rinna, Joachim, Tang, Xiaohong, Mathes, Falko, Ferdelman, Timothy G., Fry, John Christopher, Weightman, Andrew John and Parkes, Ronald John 2009. Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307). Environmental Microbiology 11 (1) , pp. 239-257. 10.1111/j.1462-2920.2008.01759.x
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Fry, John Christopher, Horsfield, Brian, Sykes, Richard, Cragg, Barry A., Heywood, Chloe, Kim, Gwang Tae, Mangelsdorf, Kai, Mildenhall, Dallas C., Rinna, Joachim, Vieth, Andrea, Zink, Klaus G., Sass, Henrik, Weightman, Andrew John and Parkes, Ronald John 2009. Prokaryotic populations and activities in an interbedded coal deposit, including a previously deeply buried section (1.6–2.3 km) above ∼ 150 Ma basement rock. Geomicrobiology Journal 26 (3) , pp. 163-178. 10.1080/01490450902724832

O'Sullivan, Louise Anne, Webster, Gordon, Fry, John Christopher, Parkes, Ronald John and Weightman, Andrew 2008. Modified linker-PCR primers facilitate complete sequencing of DGGE DNA fragments. Journal of Microbiological Methods 75 (3) , pp. 579-581. 10.1016/j.mimet.2008.08.006

Fry, John Christopher, Parkes, Ronald John, Cragg, Barry Andrew, Weightman, Andrew John and Webster, Gordon 2008. Prokaryotic biodiversity and activity in the deep subseafloor biosphere. FEMS Microbiology Ecology 66 (2) , pp. 181-196. 10.1111/j.1574-6941.2008.00566.x

O'Sullivan, L. A., Webster, Gordon, Fry, John Christopher, Parkes, Ronald John and Weightman, Andrew John 2008. Modified linker-PCR primers facilitate complete sequencing of DGGE DNA fragments. Journal of Microbiological Methods 75 (3) , pp. 579-581. 10.1016/j.mimet.2008.08.006

Parkes, Ronald John, Cragg, Barry Andrew, Banning, Natasha C., Brock, Fiona, Webster, Gordon, Fry, John Christopher, Hornibrook, Ed, Pancost, Richard D., Kelly, Sam, Knab, Nina, Jørgensen, Bo B., Rinna, Joachim and Weightman, Andrew John 2007. Biogeochemistry and biodiversity of methane cycling in subsurface marine sediments (Skagerrak, Denmark). Environmental Microbiology 9 (5) , pp. 1146-1161. 10.1111/j.1462-2920.2006.01237.x

Fry, John Christopher, Webster, Gordon, Cragg, Barry Andrew, Weightman, Andrew John and Parkes, Ronald John 2006. Analysis of DGGE profiles to explore the relationship between prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin. FEMS Microbiology Ecology 58 (1) , pp. 86-98. 10.1111/j.1574-6941.2006.00144.x
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Webster, Gordon, Parkes, Ronald John, Cragg, Barry Andrew, Newberry, C. J., Weightman, Andrew John and Fry, John Christopher 2006. Prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin. FEMS Microbiology Ecology 58 (1) , pp. 65-85. 10.1111/j.1574-6941.2006.00147.x

Webster, Gordon, Watt, Lynsey C., Rinna, Joachim, Fry, John Christopher, Evershed, Richard P., Parkes, Ronald John and Weightman, Andrew John 2006. A comparison of stable-isotope probing of DNA and phospholipid fatty acids to study prokaryotic functional diversity in sulfate-reducing marine sediment enrichment slurries. Environmental Microbiology 8 (9) , pp. 1575-1589. 10.1111/j.1462-2920.2006.01048.x
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Horsfield, B., Schenk, H. J., Zink, K., Ondrak, R., Dieckmann, V., Kallmeyer, J., Mangelsdorf, K., di Primlo, R., Wilkes, H., Parkes, Ronald John, Fry, John Christopher and Cragg, Barry Andrew 2006. Living microbial ecosystems within the active zone of catagenesis: Implications for feeding the deep biosphere. Earth and Planetary Science Letters 246 (1-2) , pp. 55-69. 10.1016/j.epsl.2006.03.040

Ashelford, Kevin E, Chuzhanova, Nadia, Fry, John Christopher, Jones, Antonia Jane and Weightman, Andrew John 2005. At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies. Applied and Environmental Microbiology 71 (12) , pp. 7724-7736. 10.1128/AEM.71.12.7724-7736.2005

Parkes, Ronald John, Webster, Gordon, Cragg, Barry Andrew, Weightman, Andrew John, Newberry, Carole Janice, Ferdelman, Timothy G., Kallmeyer, Jens, Jorgensen, Bo B., Aiello, Ivano W. and Fry, John Christopher 2005. Deep sub-seafloor prokaryotes stimulated at interfaces over geological time. Nature 436 (7049) , pp. 390-394. 10.1038/nature03796
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Banning, Natasha C., Brock, Fiona, Fry, John Christopher, Parkes, Ronald John, Hornibrook, Edward R. C. and Weightman, Andrew John 2005. Investigation of the methanogen population structure and activity in a brackish lake sediment. Environmental Microbiology 7 (7) , pp. 947-960. 10.1111/j.1462-2920.2004.00766.x

Cotter-Howells, Janet, Charnock, John M., Winters, Carole, Kille, Peter, Fry, John Christopher and Morgan, Andrew John 2005. Metal compartmentation and speciation in a soil sentinel:  the earthworm, Dendrodrilus rubidus. Environmental Science & Technology 39 (19) , pp. 7731-7740. 10.1021/es050648h

Webster, Gordon, Parkes, Ronald John, Fry, John Christopher and Weightman, Andrew John 2004. Widespread occurrence of a novel division of bacteria identified by 16S rRNA gene sequences originally found in deep marine sediments. Applied and Environmental Microbiology 70 (9) , pp. 5708-5713. 10.1128/AEM.70.9.5708-5713.2004

Newberry, Carole J., Webster, Gordon, Cragg, Barry Andrew, Parkes, Ronald John, Weightman, Andrew John and Fry, John Christopher 2004. Diversity of prokaryotes and methanogenesis in deep subsurface sediments from the Nankai Trough, Ocean Drilling Program Leg 190. Environmental Microbiology 6 (3) , pp. 274-287. 10.1111/j.1462-2920.2004.00568.x
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Ellis, Richard John, Morgan, Philip, Weightman, Andrew John and Fry, John Christopher 2003. Cultivation-dependent and -independent approaches for determining bacterial diversity in heavy-metal-contaminated soil. Applied and Environmental Microbiology 69 (6) , pp. 3223-3230. 10.1128/AEM.69.6.3223-3230.2003

O'Sullivan, Louise Anne, Weightman, Andrew John and Fry, John Christopher 2002. New degenerate Cytophaga-Flexibacter-Bacteroides-specific 16S ribosomal DNA-targeted oligonucleotide probes reveal high bacterial diversity in River Taff epilithon. Applied and environmental microbiology 68 (1) , pp. 201-210. 10.1128/AEM.68.1.201-210.2002

Marchesi, Julian Roberto, Weightman, Andrew John, Cragg, Barry Andrew, Parkes, Ronald John and Fry, John Christopher 2001. Methanogen and bacterial diversity and distribution in deep gas hydrate sediments from the Cascadia Margin as revealed by 16S rRNA molecular analysis. FEMS Microbiology Ecology 34 (3) , pp. 221-228. 10.1111/j.1574-6941.2001.tb00773.x

Bale, S. J., Goodman, K., Rochelle, Paul A., Marchesi, Julian Roberto, Fry, John Christopher, Weightman, Andrew John and Parkes, Ronald John 1997. Desulfovibrio profundus sp. nov., a novel barophilic sulfate-reducing bacterium from deep sediment layers in the Japan Sea. International Journal of Systematic Bacteriology 47 (2) , pp. 515-521. 10.1099/00207713-47-2-515

Parkes, Ronald John, Cragg, Barry Andrew, Bale, S. J., Goodman, K. and Fry, John Christopher 1995. A combined ecological and physiological approach to studying sulphate reduction within deep marine sediment layers. Journal of Microbiological Methods 23 (2) , pp. 235-249. 10.1016/0167-7012(95)00036-K

Cragg, Barry Andrew, Parkes, Ronald John, Fry, John Christopher, Weightman, Andrew John, Maxwell, J. R., Kastner, M., Hovland, M., Whiticar, M. J., Sample, J. C. and Stein, R. 1995. Bacterial Profiles in Deep Sediments of the Santa Barbara Basin, Site 893. Proceedings of the Ocean Drilling Program Scientific Results 146-2 , pp. 139-144. 10.2973/odp.proc.sr.146-2.302.1995

Cragg, Barry Andrew, Parkes, Ronald John, Fry, John Christopher, Weightman, Andrew John, Rochelle, Paul A., Maxwell, James R., Kastner, Miriam, Hovland, M., Whiticar, Michael J. and Sample, James C. 1995. The Impact of Fluid and Gas Venting on Bacterial Populations and Processes in Sediments from the Cascadia Margin Accretionary System (Sites 888-892) and the Geochemical Consequences. Proceedings of the Ocean Drilling Program Scientific Results 146-1 , pp. 399-411. 10.2973/odp.proc.sr.146-1.241.1995

Parkes, Ronald John, Cragg, Barry Andrew, Bale, S. J., Getlifff, J. M., Goodman, K., Rochelle, Paul Anthony, Fry, John Christopher, Weightman, Andrew John and Harvey, S. M. 1994. Deep bacterial biosphere in Pacific Ocean sediments. Nature 371 (6496) , pp. 410-413. 10.1038/371410a0

Rochelle, Paul A., Cragg, Barry Andrew, Fry, John Christopher, Parkes, Ronald John and Weightman, Andrew John 1994. Effect of sample handling on estimation of bacterial diversity in marine sediments by 16S rRNA gene sequence analysis. FEMS Microbiology Ecology 15 (1-2) , pp. 215-225. 10.1111/j.1574-6941.1994.tb00245.x

Parkes, Ronald John, Cragg, Barry Andrew, Getliff, J. M., Harvey, S. M., Fry, John Christopher, Lewis, C. A. and Rowland, S. J. 1993. A quantitative study of microbial decomposition of biopolymers in Recent sediments from the Peru Margin. Marine Geology 113 (1-2) , pp. 55-66. 10.1016/0025-3227(93)90149-P

Getliff, J. M., Fry, John Christopher, Cragg, Barry Andrew and Parkes, Ronald John 1992. The potential for bacteria growth in deep sediment layers of the Japan Sea, Hole 798B-Leg 128. Proceedings of the Ocean Drilling Program Scientific Results 127/8 (1) , pp. 755-760. 10.2973/odp.proc.sr.127128-1.183.1992

Rochelle, Paul A., Fry, John Christopher, Parkes, Ronald and Weightman, Andrew John 1992. DNA extraction for 16S rRNA gene analysis to determine genetic diversity in deep sediment communities. FEMS Microbiology Letters 100 (1-3) , pp. 59-65. 10.1111/j.1574-6968.1992.tb14019.x

Cragg, Barry Andrew, Harvey, S. M., Fry, John Christopher, Herbert, R. A. and Parkes, Ronald John 1992. Bacterial biomass and activity in the deep sediment layers of the Japan Sea, Hole 798B. Proceedings of the Ocean Drilling Program Scientific Results 127/8 (1) , pp. 761-776. 10.2973/odp.proc.sr.127128-1.184.1992

Parkes, Ronald John, Cragg, Barry Andrew, Fry, John Christopher, Herbert, R. A., Wimpenny, J. W. T., Allen, J. A. and Whitfield, M. 1990. Bacterial biomass and activity in deep sediment layers from the Peru Margin [and discussion]. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 331 (1616) , pp. 139-153. 10.1098/rsta.1990.0061

Cragg, Barry Andrew, Parkes, Ronald John, Fry, John Christopher, Herbert, R. A., Wimpenny, Julian W. T. and Getliff, J. M. 1990. Bacterial biomass and activity profiles within deep sediment layers. Proceedings of the Ocean Drilling Program Scientific Results 112 , pp. 607-619. 10.2973/odp.proc.sr.112.161.1990

Lloyd, D., Edwards, S. W. and Fry, J. C. 1982. Temperature-compensated oscillations in respiration and cellular protein content in synchronous cultures of Acanthamoeba castellanii. Proceedings of the National Academy of Sciences of the United States of America 79 (12) , pp. 3785-3788. 10.1073/pnas.79.12.3785

This list was generated on Fri Feb 21 06:29:04 2020 GMT.